HL_6SPC_012

3D structure

PDB id

6SPC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GCAGUAAGUUAAUACCUUGCUGUU

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPC|1|a|G|449
6SPC|1|a|C|450
6SPC|1|a|A|451
6SPC|1|a|G|452
6SPC|1|a|U|453
6SPC|1|a|A|454
6SPC|1|a|A|455
6SPC|1|a|G|456
6SPC|1|a|U|457
6SPC|1|a|U|458
6SPC|1|a|A|459
6SPC|1|a|A|460
6SPC|1|a|U|461
6SPC|1|a|A|462
6SPC|1|a|C|463
6SPC|1|a|C|464
6SPC|1|a|U|465
6SPC|1|a|U|466
6SPC|1|a|G|467
6SPC|1|a|C|468
6SPC|1|a|U|469
6SPC|1|a|G|470
6SPC|1|a|U|471
6SPC|1|a|U|472

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16