HL_6SPC_023
3D structure
- PDB id
- 6SPC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- CUUAGUUACCAGCACCUCGGGUGGGCACUCUAAG
- Length
- 34 nucleotides
- Bulged bases
- 6SPC|1|a|U|1119, 6SPC|1|a|U|1120, 6SPC|1|a|C|1139, 6SPC|1|a|U|1144
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPC|1|a|C|1114
6SPC|1|a|U|1115
6SPC|1|a|U|1116
6SPC|1|a|A|1117
6SPC|1|a|G|1118
6SPC|1|a|U|1119
6SPC|1|a|U|1120
6SPC|1|a|A|1121
6SPC|1|a|C|1122
6SPC|1|a|C|1123
6SPC|1|a|A|1124
6SPC|1|a|G|1125
6SPC|1|a|C|1126
6SPC|1|a|A|1127
6SPC|1|a|C|1128
6SPC|1|a|C|1129
6SPC|1|a|U|1130
6SPC|1|a|C|1131
6SPC|1|a|G|1132
6SPC|1|a|G|1133
6SPC|1|a|G|1134
6SPC|1|a|U|1135
6SPC|1|a|G|1136
6SPC|1|a|G|1137
6SPC|1|a|G|1138
6SPC|1|a|C|1139
6SPC|1|a|A|1140
6SPC|1|a|C|1141
6SPC|1|a|U|1142
6SPC|1|a|C|1143
6SPC|1|a|U|1144
6SPC|1|a|A|1145
6SPC|1|a|A|1146
6SPC|1|a|G|1147
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: