HL_6SZS_022
3D structure
- PDB id
- 6SZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 6SZS|1|A|U|747, 6SZS|1|A|A|751, 6SZS|1|A|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SZS_022 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1085
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6SZS|1|A|U|744
6SZS|1|A|G|745
6SZS|1|A|U|746
6SZS|1|A|U|747
6SZS|1|A|G|748
6SZS|1|A|A|749
6SZS|1|A|A|750
6SZS|1|A|A|751
6SZS|1|A|A|752
6SZS|1|A|A|753
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 2
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain S
- 50S ribosomal protein L22
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