HL_6SZS_051

3D structure

PDB id

6SZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GUGGACGCCAGUCUGC

Length

16 nucleotides

Bulged bases

6SZS|1|A|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SZS|1|A|G|2138
6SZS|1|A|U|2139
6SZS|1|A|G|2140
6SZS|1|A|G|2141
6SZS|1|A|A|2142
6SZS|1|A|C|2143
6SZS|1|A|G|2144
6SZS|1|A|C|2145
6SZS|1|A|C|2146
6SZS|1|A|A|2147
6SZS|1|A|G|2148
6SZS|1|A|U|2149
6SZS|1|A|C|2150
6SZS|1|A|U|2151
6SZS|1|A|G|2152
6SZS|1|A|C|2153

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11