HL_6SZS_066
3D structure
- PDB id
- 6SZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 6SZS|1|A|G|2751, 6SZS|1|A|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6SZS_066 not in the Motif Atlas
- Homologous match to HL_4WF9_062
- Geometric discrepancy: 0.0997
- The information below is about HL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.1
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
6SZS|1|A|C|2745
6SZS|1|A|U|2746
6SZS|1|A|G|2747
6SZS|1|A|A|2748
6SZS|1|A|A|2749
6SZS|1|A|A|2750
6SZS|1|A|G|2751
6SZS|1|A|C|2752
6SZS|1|A|A|2753
6SZS|1|A|U|2754
6SZS|1|A|C|2755
6SZS|1|A|U|2756
6SZS|1|A|A|2757
6SZS|1|A|A|2758
6SZS|1|A|G|2759
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
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