HL_6T3K_004

3D structure

PDB id

6T3K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

GGAACAC

Length

7 nucleotides

Bulged bases

6T3K|1|A|A|137, 6T3K|1|A|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T3K_004 not in the Motif Atlas

Homologous match to HL_5J02_004

Geometric discrepancy: 0.2243

The information below is about HL_5J02_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T3K|1|A|G|135
6T3K|1|A|G|136
6T3K|1|A|A|137
6T3K|1|A|A|138
6T3K|1|A|C|139
6T3K|1|A|A|140
6T3K|1|A|C|141

Current chains

Chain A

Group IIC Intron Ribozyme

Nearby chains