HL_6T4Q_019

3D structure

PDB id

6T4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUGUUUUGUAUUUCAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T4Q|1|C1|G|443
6T4Q|1|C1|U|444
6T4Q|1|C1|G|445
6T4Q|1|C1|U|446
6T4Q|1|C1|U|447
6T4Q|1|C1|U|448
6T4Q|1|C1|U|449
6T4Q|1|C1|G|450
6T4Q|1|C1|U|451
6T4Q|1|C1|A|486
6T4Q|1|C1|U|487
6T4Q|1|C1|U|488
6T4Q|1|C1|U|489
6T4Q|1|C1|C|490
6T4Q|1|C1|A|491
6T4Q|1|C1|C|492

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6-B