HL_6T4Q_104

3D structure

PDB id

6T4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

UUUUUUAAUG

Length

10 nucleotides

Bulged bases

6T4Q|1|C2|U|1059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T4Q|1|C2|U|1055
6T4Q|1|C2|U|1056
6T4Q|1|C2|U|1057
6T4Q|1|C2|U|1058
6T4Q|1|C2|U|1059
6T4Q|1|C2|U|1060
6T4Q|1|C2|A|1061
6T4Q|1|C2|A|1062
6T4Q|1|C2|U|1063
6T4Q|1|C2|G|1064

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SB

40S ribosomal protein S1-A

Chain Sb

40S ribosomal protein S27-A