HL_6T7I_018

3D structure

PDB id

6T7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUGUUUUGUAUUUCAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T7I|1|C1|G|443
6T7I|1|C1|U|444
6T7I|1|C1|G|445
6T7I|1|C1|U|446
6T7I|1|C1|U|447
6T7I|1|C1|U|448
6T7I|1|C1|U|449
6T7I|1|C1|G|450
6T7I|1|C1|U|451
6T7I|1|C1|A|486
6T7I|1|C1|U|487
6T7I|1|C1|U|488
6T7I|1|C1|U|489
6T7I|1|C1|C|490
6T7I|1|C1|A|491
6T7I|1|C1|C|492

Current chains

Chain C1

25S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6-B