HL_6T7I_095

3D structure

PDB id

6T7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGCCGGUCGGAUUUCCA

Length

18 nucleotides

Bulged bases

6T7I|1|C2|C|658

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T7I|1|C2|U|650
6T7I|1|C2|G|651
6T7I|1|C2|G|652
6T7I|1|C2|C|653
6T7I|1|C2|C|654
6T7I|1|C2|G|655
6T7I|1|C2|G|656
6T7I|1|C2|U|657
6T7I|1|C2|C|658
6T7I|1|C2|G|676
6T7I|1|C2|G|677
6T7I|1|C2|A|678
6T7I|1|C2|U|679
6T7I|1|C2|U|680
6T7I|1|C2|U|681
6T7I|1|C2|C|682
6T7I|1|C2|C|683
6T7I|1|C2|A|684

Current chains

Chain C2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9-A