HL_6T7T_031

3D structure

PDB id

6T7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

6T7T|1|C1|G|1131

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T7T_031 not in the Motif Atlas

Geometric match to HL_5TBW_025

Geometric discrepancy: 0.1085

The information below is about HL_5TBW_025

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6T7T|1|C1|G|1126
6T7T|1|C1|G|1127
6T7T|1|C1|U|1128
6T7T|1|C1|A|1129
6T7T|1|C1|A|1130
6T7T|1|C1|G|1131
6T7T|1|C1|C|1132

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10