HL_6T83_010

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_010 not in the Motif Atlas

Homologous match to HL_5TBW_010

Geometric discrepancy: 0.0975

The information below is about HL_5TBW_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

6T83|1|1b|A|357
6T83|1|1b|G|358
6T83|1|1b|U|359
6T83|1|1b|G|360
6T83|1|1b|A|361
6T83|1|1b|U|362

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Cy

60S ribosomal protein L4-A

Chain jb

60S ribosomal protein L37-A

Chain lb

60S ribosomal protein L39