HL_6T83_088

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCUAACCUUGAGCUUGGCGAAC

Length

22 nucleotides

Bulged bases

6T83|1|2b|C|709, 6T83|1|2b|U|711, 6T83|1|2b|G|714, 6T83|1|2b|C|726

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|2b|G|703
6T83|1|2b|C|704
6T83|1|2b|U|705
6T83|1|2b|A|706
6T83|1|2b|A|707
6T83|1|2b|C|708
6T83|1|2b|C|709
6T83|1|2b|U|710
6T83|1|2b|U|711
6T83|1|2b|G|712
6T83|1|2b|A|713
6T83|1|2b|G|714
6T83|1|2b|C|726
6T83|1|2b|U|727
6T83|1|2b|U|728
6T83|1|2b|G|729
6T83|1|2b|G|730
6T83|1|2b|C|731
6T83|1|2b|G|732
6T83|1|2b|A|733
6T83|1|2b|A|734
6T83|1|2b|C|735

Current chains

Chain 2b

18S rRNA

Nearby chains

Chain Eb

40S ribosomal protein S4-A