HL_6T83_123
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_123 not in the Motif Atlas
- Homologous match to HL_8C3A_003
- Geometric discrepancy: 0.151
- The information below is about HL_8C3A_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67216.9
- Basepair signature
- cWW-cWW-F-tSH
- Number of instances in this motif group
- 9
Unit IDs
6T83|1|Aa|C|90
6T83|1|Aa|G|91
6T83|1|Aa|G|92
6T83|1|Aa|C|93
6T83|1|Aa|G|94
6T83|1|Aa|A|95
6T83|1|Aa|G|96
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L18-A
- Chain L
- 60S ribosomal protein L28
- Chain Na
- 60S ribosomal protein L13-A
- Chain Z
- 60S ribosomal protein L42-A
Coloring options: