HL_6T83_129
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GGUAAAUUCC
- Length
- 10 nucleotides
- Bulged bases
- 6T83|1|Aa|G|304, 6T83|1|Aa|U|305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_129 not in the Motif Atlas
- Homologous match to HL_5TBW_009
- Geometric discrepancy: 0.1399
- The information below is about HL_5TBW_009
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_15076.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6T83|1|Aa|G|303
6T83|1|Aa|G|304
6T83|1|Aa|U|305
6T83|1|Aa|A|306
6T83|1|Aa|A|307
6T83|1|Aa|A|308
6T83|1|Aa|U|309
6T83|1|Aa|U|310
6T83|1|Aa|C|311
6T83|1|Aa|C|312
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L28
- Chain Na
- 60S ribosomal protein L13-A
- Chain Pa
- 60S ribosomal protein L15-A
- Chain T
- 60S ribosomal protein L36-A
- Chain Z
- 60S ribosomal protein L42-A
Coloring options: