HL_6T83_157

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

6T83|1|Aa|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_157 not in the Motif Atlas

Homologous match to HL_8C3A_037

Geometric discrepancy: 0.1452

The information below is about HL_8C3A_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6T83|1|Aa|G|1680
6T83|1|Aa|U|1681
6T83|1|Aa|U|1682
6T83|1|Aa|A|1683
6T83|1|Aa|U|1684
6T83|1|Aa|C|1685
6T83|1|Aa|U|1686
6T83|1|Aa|U|1687
6T83|1|Aa|U|1688

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain C

60S ribosomal protein L19-A

Chain F

60S ribosomal protein L22-A