HL_6T83_173

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

6T83|1|Aa|U|2538, 6T83|1|Aa|C|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|Aa|G|2534
6T83|1|Aa|A|2535
6T83|1|Aa|A|2536
6T83|1|Aa|U|2537
6T83|1|Aa|U|2538
6T83|1|Aa|C|2539
6T83|1|Aa|A|2540
6T83|1|Aa|U|2541
6T83|1|Aa|U|2542
6T83|1|Aa|U|2543
6T83|1|Aa|U|2544
6T83|1|Aa|C|2545

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain 2b

Small subunit ribosomal RNA; SSU rRNA

Chain Eb

40S ribosomal protein S4-A

Chain R

60S ribosomal protein L34-A