HL_6T83_202

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6T83|1|a|U|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6T83_202 not in the Motif Atlas

Geometric match to HL_5LYS_002

Geometric discrepancy: 0.2338

The information below is about HL_5LYS_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6T83|1|a|C|230
6T83|1|a|U|231
6T83|1|a|U|232
6T83|1|a|C|233
6T83|1|a|G|234
6T83|1|a|G|235

Current chains

Chain a

18S rRNA

Nearby chains