HL_6T83_220
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUUUUUAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_220 not in the Motif Atlas
- Homologous match to HL_8P9A_212
- Geometric discrepancy: 0.4995
- The information below is about HL_8P9A_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97917.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6T83|1|a|U|1055
6T83|1|a|U|1056
6T83|1|a|U|1057
6T83|1|a|U|1058
6T83|1|a|U|1059
6T83|1|a|U|1060
6T83|1|a|A|1061
6T83|1|a|A|1062
6T83|1|a|U|1063
6T83|1|a|G|1064
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain 2
- 40S ribosomal protein S27-A
- Chain Vb
- 40S ribosomal protein S21-A
- Chain c
- 40S ribosomal protein S1-A
- Chain s
- 40S ribosomal protein S17-B
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