HL_6T83_235
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUUCAGUGUGA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T83_235 not in the Motif Atlas
- Geometric match to HL_6UGG_005
- Geometric discrepancy: 0.3994
- The information below is about HL_6UGG_005
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_83632.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6T83|1|1b|U|2723
6T83|1|1b|U|2724
6T83|1|1b|U|2725
6T83|1|1b|C|2726
6T83|1|1b|A|2727
6T83|1|1b|G|2728
6T83|1|1b|U|2729
6T83|1|1b|G|2730
6T83|1|1b|U|2731
6T83|1|1b|G|2732
6T83|1|1b|A|2733
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain Qy
- 60S ribosomal protein L18-A
- Chain Ty
- 60S ribosomal protein L21-A
- Chain ay
- 60S ribosomal protein L28
- Chain ob
- 60S ribosomal protein L42-A
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