HL_6TH6_093

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GG(OMU)GUUCAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6TH6_093 not in the Motif Atlas

Homologous match to HL_4V9F_064

Geometric discrepancy: 0.2407

The information below is about HL_4V9F_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|BA|G|2654
6TH6|1|BA|G|2655
6TH6|1|BA|OMU|2656
6TH6|1|BA|G|2657
6TH6|1|BA|U|2658
6TH6|1|BA|U|2659
6TH6|1|BA|C|2660
6TH6|1|BA|A|2661
6TH6|1|BA|C|2662

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BL

50S ribosomal protein L14