HL_6TH6_099

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6TH6_099 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.1691

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

6TH6|1|BA|G|2986
6TH6|1|BA|G|2987
6TH6|1|BA|A|2988
6TH6|1|BA|A|2989
6TH6|1|BA|A|2990
6TH6|1|BA|C|2991

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain Ak

30S ribosomal protein S8e