HL_6TNN_030
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6TNN_030 not in the Motif Atlas
- Homologous match to HL_7A0S_029
- Geometric discrepancy: 0.4502
- The information below is about HL_7A0S_029
- Detailed Annotation
- GNRA related
- Broad Annotation
- T-loop
- Motif group
- HL_92598.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6TNN|1|U|C|1136
6TNN|1|U|G|1137
6TNN|1|U|U|1138
6TNN|1|U|A|1139
6TNN|1|U|A|1140
6TNN|1|U|U|1141
6TNN|1|U|A|1142
6TNN|1|U|G|1143
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain t
- 50S ribosomal protein L36
Coloring options: