3D structure

PDB id
6TNN (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.07 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6TNN_030 not in the Motif Atlas
Homologous match to HL_7A0S_029
Geometric discrepancy: 0.4502
The information below is about HL_7A0S_029
Detailed Annotation
GNRA related
Broad Annotation
T-loop
Motif group
HL_92598.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
13

Unit IDs

6TNN|1|U|C|1136
6TNN|1|U|G|1137
6TNN|1|U|U|1138
6TNN|1|U|A|1139
6TNN|1|U|A|1140
6TNN|1|U|U|1141
6TNN|1|U|A|1142
6TNN|1|U|G|1143

Current chains

Chain U
pre-23S rRNA

Nearby chains

Chain t
50S ribosomal protein L36

Coloring options:


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