HL_6TNU_016

3D structure

PDB id

6TNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGCCGGUCGGAUUUCCA

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNU|1|2|U|650
6TNU|1|2|G|651
6TNU|1|2|G|652
6TNU|1|2|C|653
6TNU|1|2|C|654
6TNU|1|2|G|655
6TNU|1|2|G|656
6TNU|1|2|U|657
6TNU|1|2|C|658
6TNU|1|2|G|676
6TNU|1|2|G|677
6TNU|1|2|A|678
6TNU|1|2|U|679
6TNU|1|2|U|680
6TNU|1|2|U|681
6TNU|1|2|C|682
6TNU|1|2|C|683
6TNU|1|2|A|684

Current chains

Chain 2

18S rRNA

Nearby chains

Chain W

40S ribosomal protein S9-A