HL_6TNU_122

3D structure

PDB id

6TNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UACAAUGUAAAUACCUUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNU|1|2|U|517
6TNU|1|2|A|518
6TNU|1|2|C|519
6TNU|1|2|A|520
6TNU|1|2|A|521
6TNU|1|2|U|522
6TNU|1|2|G|523
6TNU|1|2|U|524
6TNU|1|2|A|525
6TNU|1|2|A|526
6TNU|1|2|A|527
6TNU|1|2|U|528
6TNU|1|2|A|529
6TNU|1|2|C|530
6TNU|1|2|C|531
6TNU|1|2|U|532
6TNU|1|2|U|533
6TNU|1|2|A|534
6TNU|1|2|A|535

Current chains

Chain 2

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S4-A

Chain W

40S ribosomal protein S9-A

Chain d

40S ribosomal protein S24-A