HL_6UCQ_028

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6UCQ|1|1A|A|1067, 6UCQ|1|1A|G|1068, 6UCQ|1|1A|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UCQ_028 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.3847

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6UCQ|1|1A|C|1064
6UCQ|1|1A|U|1065
6UCQ|1|1A|U|1066
6UCQ|1|1A|A|1067
6UCQ|1|1A|G|1068
6UCQ|1|1A|A|1069
6UCQ|1|1A|A|1070
6UCQ|1|1A|G|1071
6UCQ|1|1A|C|1072
6UCQ|1|1A|A|1073
6UCQ|1|1A|G|1074

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1v

50S ribosomal protein L9,Elongation factor G