HL_6UCQ_066

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGCAGCC

Length

7 nucleotides

Bulged bases

6UCQ|1|1A|A|2801|||A

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UCQ_066 not in the Motif Atlas

Geometric match to HL_2AZX_004

Geometric discrepancy: 0.3988

The information below is about HL_2AZX_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20811.4

Basepair signature

cWW-cWS-F

Number of instances in this motif group

14

Unit IDs

6UCQ|1|1A|G|2792
6UCQ|1|1A|G|2793
6UCQ|1|1A|C|2794
6UCQ|1|1A|A|2801|||A
6UCQ|1|1A|G|2802
6UCQ|1|1A|C|2803
6UCQ|1|1A|C|2804

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains