HL_6UCQ_078

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UCQ_078 not in the Motif Atlas

Homologous match to HL_6CZR_079

Geometric discrepancy: 0.1195

The information below is about HL_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.2

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6UCQ|1|1a|C|320
6UCQ|1|1a|A|321
6UCQ|1|1a|C|322
6UCQ|1|1a|U|323
6UCQ|1|1a|G|324
6UCQ|1|1a|A|325
6UCQ|1|1a|G|326
6UCQ|1|1a|A|327
6UCQ|1|1a|C|328
6UCQ|1|1a|A|329
6UCQ|1|1a|C|330
6UCQ|1|1a|G|331
6UCQ|1|1a|G|332
6UCQ|1|1a|G|333

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1p

30S ribosomal protein S16

Chain 1t

30S ribosomal protein S20