HL_6UCQ_159
3D structure
- PDB id
- 6UCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome recycling complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 6UCQ|1|2A|G|2250
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UCQ_159 not in the Motif Atlas
- Homologous match to HL_7A0S_052
- Geometric discrepancy: 0.1418
- The information below is about HL_7A0S_052
- Detailed Annotation
- LSU P loop
- Broad Annotation
- LSU P loop
- Motif group
- HL_11974.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
6UCQ|1|2A|C|2248
6UCQ|1|2A|U|2249
6UCQ|1|2A|G|2250
6UCQ|1|2A|OMG|2251
6UCQ|1|2A|G|2252
6UCQ|1|2A|G|2253
6UCQ|1|2A|C|2254
6UCQ|1|2A|G|2255
6UCQ|1|2A|G|2256
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 20
- 50S ribosomal protein L27
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2w
- Ribosome-recycling factor
- Chain 2x
- Transfer RNA; tRNA
Coloring options: