HL_6UO1_182
3D structure
- PDB id
- 6UO1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 6UO1|1|2B|U|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UO1_182 not in the Motif Atlas
- Homologous match to HL_7RQB_070
- Geometric discrepancy: 0.1048
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6UO1|1|2B|C|38
6UO1|1|2B|A|39
6UO1|1|2B|U|40
6UO1|1|2B|U|41
6UO1|1|2B|C|42
6UO1|1|2B|C|43
6UO1|1|2B|G|44
Current chains
- Chain 2B
- 5S Ribosomal RNA
Nearby chains
- Chain 24
- 50S ribosomal protein L31
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2G
- 50S ribosomal protein L5
- Chain 2S
- 50S ribosomal protein L18
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