HL_6UZ7_011

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCAAGG

Length

6 nucleotides

Bulged bases

6UZ7|1|2|A|415

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_011 not in the Motif Atlas

Homologous match to HL_4V88_196

Geometric discrepancy: 0.262

The information below is about HL_4V88_196

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6UZ7|1|2|C|413
6UZ7|1|2|C|414
6UZ7|1|2|A|415
6UZ7|1|2|A|416
6UZ7|1|2|G|417
6UZ7|1|2|G|418

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 1

KLLA0F23265p

Chain AV

KLLA0E06997p

Chain G

40S ribosomal protein S6