HL_6UZ7_030

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACUUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_030 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.368

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

6UZ7|1|2|C|1358
6UZ7|1|2|A|1359
6UZ7|1|2|C|1360
6UZ7|1|2|U|1361
6UZ7|1|2|U|1362
6UZ7|1|2|G|1363

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain F

KLLA0D10659p

Chain Q

40S ribosomal protein S16

Chain T

KLLA0A07194p