HL_6UZ7_031

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

6UZ7|1|2|C|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_031 not in the Motif Atlas

Homologous match to HL_4V88_217

Geometric discrepancy: 0.4259

The information below is about HL_4V88_217

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_67216.9

Basepair signature

cWW-cWW-F-tSH

Number of instances in this motif group

9

Unit IDs

6UZ7|1|2|U|1394
6UZ7|1|2|U|1395
6UZ7|1|2|U|1396
6UZ7|1|2|C|1397
6UZ7|1|2|A|1398
6UZ7|1|2|A|1399
6UZ7|1|2|G|1400

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain R

KLLA0B01474p

Chain g

KLLA0E12277p