HL_6UZ7_038
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- 6UZ7|1|3|G|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UZ7_038 not in the Motif Atlas
- Homologous match to HL_4WT8_216
- Geometric discrepancy: 0.2559
- The information below is about HL_4WT8_216
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
6UZ7|1|3|A|31
6UZ7|1|3|U|32
6UZ7|1|3|U|33
6UZ7|1|3|G|34
6UZ7|1|3|A|35
6UZ7|1|3|A|36
6UZ7|1|3|A|37
6UZ7|1|3|A|38
6UZ7|1|3|U|39
Current chains
- Chain 3
- RNA (76-MER)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Q
- 40S ribosomal protein S16
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