HL_6UZ7_062

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUGAAAUGA

Length

9 nucleotides

Bulged bases

6UZ7|1|5|A|996, 6UZ7|1|5|U|999

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_062 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3288

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.2

Basepair signature

cWW-cWW

Number of instances in this motif group

3

Unit IDs

6UZ7|1|5|U|993
6UZ7|1|5|U|994
6UZ7|1|5|G|995
6UZ7|1|5|A|996
6UZ7|1|5|A|997
6UZ7|1|5|A|998
6UZ7|1|5|U|999
6UZ7|1|5|G|1000
6UZ7|1|5|A|1001

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AJ

KLLA0F08261p