HL_6UZ7_074

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6UZ7|1|5|U|1575, 6UZ7|1|5|U|1576

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_074 not in the Motif Atlas

Homologous match to HL_5TBW_035

Geometric discrepancy: 0.162

The information below is about HL_5TBW_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35087.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6UZ7|1|5|G|1568
6UZ7|1|5|U|1569
6UZ7|1|5|U|1570
6UZ7|1|5|A|1571
6UZ7|1|5|A|1572
6UZ7|1|5|U|1573
6UZ7|1|5|A|1574
6UZ7|1|5|U|1575
6UZ7|1|5|U|1576
6UZ7|1|5|C|1577

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AR

KLLA0E12453p

Chain AX

60S ribosomal protein L25

Chain Bg

KLLA0C08371p