HL_6UZ7_079

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCUUG

Length

5 nucleotides

Bulged bases

6UZ7|1|5|C|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_079 not in the Motif Atlas

Homologous match to HL_8C3A_040

Geometric discrepancy: 0.1424

The information below is about HL_8C3A_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

6UZ7|1|5|C|1761
6UZ7|1|5|C|1762
6UZ7|1|5|U|1763
6UZ7|1|5|U|1764
6UZ7|1|5|G|1765

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AA

KLLA0D16027p

Chain Bp

KLLA0E05941p