HL_6UZ7_092

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

6UZ7|1|5|G|2586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_092 not in the Motif Atlas

Homologous match to HL_5TBW_054

Geometric discrepancy: 0.1399

The information below is about HL_5TBW_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

6UZ7|1|5|C|2584
6UZ7|1|5|U|2585
6UZ7|1|5|G|2586
6UZ7|1|5|G|2587
6UZ7|1|5|G|2588
6UZ7|1|5|G|2589
6UZ7|1|5|C|2590
6UZ7|1|5|G|2591
6UZ7|1|5|G|2592

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AI

KLLA0D05643p

Chain Bb

60S ribosomal protein L29