HL_6UZ7_094

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AACAGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6UZ7_094 not in the Motif Atlas

Homologous match to HL_5TBW_056

Geometric discrepancy: 0.1821

The information below is about HL_5TBW_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6UZ7|1|5|A|2641
6UZ7|1|5|A|2642
6UZ7|1|5|C|2643
6UZ7|1|5|A|2644
6UZ7|1|5|G|2645
6UZ7|1|5|A|2646
6UZ7|1|5|A|2647
6UZ7|1|5|A|2648
6UZ7|1|5|U|2649

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AJ

KLLA0F08261p