HL_6UZ7_117

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGCUAACCUGUACUCCUUGUGGGUGCAGGCGAACC

Length

35 nucleotides

Bulged bases

6UZ7|1|2|C|709, 6UZ7|1|2|U|715, 6UZ7|1|2|U|718, 6UZ7|1|2|U|719, 6UZ7|1|2|U|721, 6UZ7|1|2|A|733

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|G|702
6UZ7|1|2|G|703
6UZ7|1|2|C|704
6UZ7|1|2|U|705
6UZ7|1|2|A|706
6UZ7|1|2|A|707
6UZ7|1|2|C|708
6UZ7|1|2|C|709
6UZ7|1|2|U|710
6UZ7|1|2|G|711
6UZ7|1|2|U|712
6UZ7|1|2|A|713
6UZ7|1|2|C|714
6UZ7|1|2|U|715
6UZ7|1|2|C|716
6UZ7|1|2|C|717
6UZ7|1|2|U|718
6UZ7|1|2|U|719
6UZ7|1|2|G|720
6UZ7|1|2|U|721
6UZ7|1|2|G|722
6UZ7|1|2|G|723
6UZ7|1|2|G|724
6UZ7|1|2|U|725
6UZ7|1|2|G|726
6UZ7|1|2|C|727
6UZ7|1|2|A|728
6UZ7|1|2|G|729
6UZ7|1|2|G|730
6UZ7|1|2|C|731
6UZ7|1|2|G|732
6UZ7|1|2|A|733
6UZ7|1|2|A|734
6UZ7|1|2|C|735
6UZ7|1|2|C|736

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4