HL_6UZ7_120

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUAGAGAAGGGGGCAACUCCAUCUCAGAG

Length

30 nucleotides

Bulged bases

6UZ7|1|2|A|1691, 6UZ7|1|2|A|1692, 6UZ7|1|2|G|1693, 6UZ7|1|2|G|1694, 6UZ7|1|2|G|1695, 6UZ7|1|2|G|1696, 6UZ7|1|2|G|1697, 6UZ7|1|2|C|1698, 6UZ7|1|2|A|1699, 6UZ7|1|2|A|1700, 6UZ7|1|2|C|1701, 6UZ7|1|2|U|1702, 6UZ7|1|2|C|1703, 6UZ7|1|2|C|1704, 6UZ7|1|2|A|1705

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|C|1684
6UZ7|1|2|U|1685
6UZ7|1|2|U|1686
6UZ7|1|2|A|1687
6UZ7|1|2|G|1688
6UZ7|1|2|A|1689
6UZ7|1|2|G|1690
6UZ7|1|2|A|1691
6UZ7|1|2|A|1692
6UZ7|1|2|G|1693
6UZ7|1|2|G|1694
6UZ7|1|2|G|1695
6UZ7|1|2|G|1696
6UZ7|1|2|G|1697
6UZ7|1|2|C|1698
6UZ7|1|2|A|1699
6UZ7|1|2|A|1700
6UZ7|1|2|C|1701
6UZ7|1|2|U|1702
6UZ7|1|2|C|1703
6UZ7|1|2|C|1704
6UZ7|1|2|A|1705
6UZ7|1|2|U|1706
6UZ7|1|2|C|1707
6UZ7|1|2|U|1708
6UZ7|1|2|C|1709
6UZ7|1|2|A|1710
6UZ7|1|2|G|1711
6UZ7|1|2|A|1712
6UZ7|1|2|G|1713

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S6