HL_6UZ7_125
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGCUGGAAUUCAUUUUCCACGUUCUAGCAUUCAAAGUCCUAUACGGGCUGAU
- Length
- 52 nucleotides
- Bulged bases
- 6UZ7|1|5|U|2506, 6UZ7|1|5|U|2507, 6UZ7|1|5|C|2508, 6UZ7|1|5|A|2509, 6UZ7|1|5|U|2511, 6UZ7|1|5|G|2518, 6UZ7|1|5|U|2519, 6UZ7|1|5|U|2520, 6UZ7|1|5|C|2521, 6UZ7|1|5|U|2522, 6UZ7|1|5|A|2523, 6UZ7|1|5|C|2529, 6UZ7|1|5|A|2538
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UZ7|1|5|A|2498
6UZ7|1|5|G|2499
6UZ7|1|5|C|2500
6UZ7|1|5|U|2501
6UZ7|1|5|G|2502
6UZ7|1|5|G|2503
6UZ7|1|5|A|2504
6UZ7|1|5|A|2505
6UZ7|1|5|U|2506
6UZ7|1|5|U|2507
6UZ7|1|5|C|2508
6UZ7|1|5|A|2509
6UZ7|1|5|U|2510
6UZ7|1|5|U|2511
6UZ7|1|5|U|2512
6UZ7|1|5|U|2513
6UZ7|1|5|C|2514
6UZ7|1|5|C|2515
6UZ7|1|5|A|2516
6UZ7|1|5|C|2517
6UZ7|1|5|G|2518
6UZ7|1|5|U|2519
6UZ7|1|5|U|2520
6UZ7|1|5|C|2521
6UZ7|1|5|U|2522
6UZ7|1|5|A|2523
6UZ7|1|5|G|2524
6UZ7|1|5|C|2525
6UZ7|1|5|A|2526
6UZ7|1|5|U|2527
6UZ7|1|5|U|2528
6UZ7|1|5|C|2529
6UZ7|1|5|A|2530
6UZ7|1|5|A|2531
6UZ7|1|5|A|2532
6UZ7|1|5|G|2533
6UZ7|1|5|U|2534
6UZ7|1|5|C|2535
6UZ7|1|5|C|2536
6UZ7|1|5|U|2537
6UZ7|1|5|A|2538
6UZ7|1|5|U|2539
6UZ7|1|5|A|2540
6UZ7|1|5|C|2541
6UZ7|1|5|G|2542
6UZ7|1|5|G|2543
6UZ7|1|5|G|2544
6UZ7|1|5|C|2545
6UZ7|1|5|U|2546
6UZ7|1|5|G|2547
6UZ7|1|5|A|2548
6UZ7|1|5|U|2549
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain AG
- KLLA0E00573p
- Chain AZ
- KLLA0E03455p
- Chain B
- 40S ribosomal protein S1
- Chain Bc
- 60S ribosomal protein L30
- Chain Bg
- KLLA0C08371p
- Chain Bp
- KLLA0E05941p
Coloring options: