HL_6UZ7_126
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUCCCGUCCGAUCA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6UZ7_126 not in the Motif Atlas
- Homologous match to HL_8P9A_183
- Geometric discrepancy: 0.1473
- The information below is about HL_8P9A_183
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01182.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
6UZ7|1|7|U|32
6UZ7|1|7|U|33
6UZ7|1|7|C|34
6UZ7|1|7|C|35
6UZ7|1|7|C|36
6UZ7|1|7|G|37
6UZ7|1|7|U|38
6UZ7|1|7|C|39
6UZ7|1|7|C|40
6UZ7|1|7|G|41
6UZ7|1|7|A|42
6UZ7|1|7|U|43
6UZ7|1|7|C|44
6UZ7|1|7|A|45
Current chains
- Chain 7
- RNA (121-MER)
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain AD
- KLLA0D06941p
- Chain AJ
- KLLA0F08261p
Coloring options: