HL_6V39_070
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GAUUAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_070 not in the Motif Atlas
- Geometric match to HL_7VTI_001
- Geometric discrepancy: 0.2553
- The information below is about HL_7VTI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.5
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 26
Unit IDs
6V39|1|B|G|83
6V39|1|B|A|84
6V39|1|B|U|85
6V39|1|B|U|86
6V39|1|B|A|87
6V39|1|B|C|88
Current chains
- Chain B
- 5s ribosomal RNA
Nearby chains
- Chain AN1
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- 50S ribosomal protein L16
- Chain U
- 50S ribosomal protein L25
- Chain Y
- 50S ribosomal protein L30
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