HL_6V39_071
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- 6V39|1|sN1|U|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6V39_071 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.145
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6V39|1|sN1|U|14
6V39|1|sN1|U|15
6V39|1|sN1|U|16
6V39|1|sN1|G|17
6V39|1|sN1|A|18
6V39|1|sN1|U|19
6V39|1|sN1|C|20
6V39|1|sN1|A|21
6V39|1|sN1|U|22
6V39|1|sN1|G|23
6V39|1|sN1|G|24
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
Coloring options: