HL_6V39_074

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6V39|1|sN1|A|184

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V39_074 not in the Motif Atlas

Geometric match to HL_5J7L_171

Geometric discrepancy: 0.1764

The information below is about HL_5J7L_171

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6V39|1|sN1|C|182
6V39|1|sN1|U|183
6V39|1|sN1|A|184
6V39|1|sN1|C|185
6V39|1|sN1|G|186
6V39|1|sN1|G|187

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20