HL_6V39_075

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UCUUCGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V39_075 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.5552

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6V39|1|sN1|U|202
6V39|1|sN1|C|203
6V39|1|sN1|U|204
6V39|1|sN1|U|205
6V39|1|sN1|C|206
6V39|1|sN1|G|207
6V39|1|sN1|G|208

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains