HL_6V3A_020

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

UUAAUAG

Length

7 nucleotides

Bulged bases

6V3A|1|AN1|U|643

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3A_020 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.1762

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6V3A|1|AN1|U|639
6V3A|1|AN1|U|640
6V3A|1|AN1|A|641
6V3A|1|AN1|A|642
6V3A|1|AN1|U|643
6V3A|1|AN1|A|644
6V3A|1|AN1|G|645

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L33

Chain 2

50S ribosomal protein L35