3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
UGAAAGG
Length
7 nucleotides
Bulged bases
6V3A|1|AN1|A|779, 6V3A|1|AN1|G|782
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6V3A_023 not in the Motif Atlas
Homologous match to HL_5J7L_156
Geometric discrepancy: 0.077
The information below is about HL_5J7L_156
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87954.2
Basepair signature
cWW-tSW-F
Number of instances in this motif group
7

Unit IDs

6V3A|1|AN1|U|777
6V3A|1|AN1|G|778
6V3A|1|AN1|A|779
6V3A|1|AN1|A|780
6V3A|1|AN1|A|781
6V3A|1|AN1|G|782
6V3A|1|AN1|G|783

Current chains

Chain AN1
23s ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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