HL_6V3A_027

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AAAACAAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6V3A_027 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.2086

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6V3A|1|AN1|A|975
6V3A|1|AN1|A|976
6V3A|1|AN1|A|977
6V3A|1|AN1|A|978
6V3A|1|AN1|C|979
6V3A|1|AN1|A|980
6V3A|1|AN1|A|981
6V3A|1|AN1|U|982

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L20

Chain Q

50S ribosomal protein L21

Chain Y

50S ribosomal protein L30